bugGNU Parallel - build and execute command lines from standard input in parallel - Bugs: bug #52560, "Perl MO=Deparse...

 
 

bug #52560: "Perl MO=Deparse parallel" fails?

Submitted by:  None
Submitted on:  Thu 30 Nov 2017 05:41:35 PM UTC  
 
Category: NoneSeverity: 3 - Normal
Item Group: NoneStatus: Need Info
Privacy: PublicAssigned to: Ole Tange <tange>
Open/Closed: Open

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Sun 17 Dec 2017 07:48:32 PM UTC, comment #2:

I've attached a file containing the output of both STDOUT and STDERR. Here is 'perl -V':
Platform:
osname=linux
osvers=4.9.0
archname=x86_64-linux-gnu-thread-multi
uname='linux localhost 4.9.0 #1 smp debian 4.9.0 x86_64 gnulinux '
config_args='-Dusethreads -Duselargefiles -Dcc=x86_64-linux-gnu-gcc -Dcpp=x86_64-linux-gnu-cpp -Dld=x86_64-linux-gnu-gcc -Dccflags=-DDEBIAN -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/perl-w2lU16/perl-5.26.1=. -fstack-protector-strong -Wformat -Werror=format-security -Dldflags= -Wl,-z,relro -Dlddlflags=-shared -Wl,-z,relro -Dcccdlflags=-fPIC -Darchname=x86_64-linux-gnu -Dprefix=/usr -Dprivlib=/usr/share/perl/5.26 -Darchlib=/usr/lib/x86_64-linux-gnu/perl/5.26 -Dvendorprefix=/usr -Dvendorlib=/usr/share/perl5 -Dvendorarch=/usr/lib/x86_64-linux-gnu/perl5/5.26 -Dsiteprefix=/usr/local -Dsitelib=/usr/local/share/perl/5.26.1 -Dsitearch=/usr/local/lib/x86_64-linux-gnu/perl/5.26.1 -Dman1dir=/usr/share/man/man1 -Dman3dir=/usr/share/man/man3 -Dsiteman1dir=/usr/local/man/man1 -Dsiteman3dir=/usr/local/man/man3 -Duse64bitint -Dman1ext=1 -Dman3ext=3perl -Dpager=/usr/bin/sensible-pager -Uafs -Ud_csh -Ud_ualarm -Uusesfio -Uusenm -Ui_libutil -Ui_xlocale -Uversiononly -DDEBUGGING=-g -Doptimize=-O2 -dEs -Duseshrplib -Dlibperl=libperl.so.5.26.1'
hint=recommended
useposix=true
d_sigaction=define
useithreads=define
usemultiplicity=define
use64bitint=define
use64bitall=define
uselongdouble=undef
usemymalloc=n
default_inc_excludes_dot=define
bincompat5005=undef
Compiler:
cc='x86_64-linux-gnu-gcc'
ccflags ='-D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64'
optimize='-O2 -g'
cppflags='-D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include'
ccversion=''
gccversion='7.2.0'
gccosandvers=''
intsize=4
longsize=8
ptrsize=8
doublesize=8
byteorder=12345678
doublekind=3
d_longlong=define
longlongsize=8
d_longdbl=define
longdblsize=16
longdblkind=3
ivtype='long'
ivsize=8
nvtype='double'
nvsize=8
Off_t='off_t'
lseeksize=8
alignbytes=8
prototype=define
Linker and Libraries:
ld='x86_64-linux-gnu-gcc'
ldflags =' -fstack-protector-strong -L/usr/local/lib'
libpth=/usr/local/lib /usr/lib/gcc/x86_64-linux-gnu/7/include-fixed /usr/include/x86_64-linux-gnu /usr/lib /lib/x86_64-linux-gnu /lib/../lib /usr/lib/x86_64-linux-gnu /usr/lib/../lib /lib
libs=-lgdbm -lgdbm_compat -ldb -ldl -lm -lpthread -lc -lcrypt
perllibs=-ldl -lm -lpthread -lc -lcrypt
libc=libc-2.25.so
so=so
useshrplib=true
libperl=libperl.so.5.26
gnulibc_version='2.25'
Dynamic Linking:
dlsrc=dl_dlopen.xs
dlext=so
d_dlsymun=undef
ccdlflags='-Wl,-E'
cccdlflags='-fPIC'
lddlflags='-shared -L/usr/local/lib -fstack-protector-strong'

Characteristics of this binary (from libperl):
Compile-time options:
HAS_TIMES
MULTIPLICITY
PERLIO_LAYERS
PERL_COPY_ON_WRITE
PERL_DONT_CREATE_GVSV
PERL_IMPLICIT_CONTEXT
PERL_MALLOC_WRAP
PERL_OP_PARENT
PERL_PRESERVE_IVUV
USE_64_BIT_ALL
USE_64_BIT_INT
USE_ITHREADS
USE_LARGE_FILES
USE_LOCALE
USE_LOCALE_COLLATE
USE_LOCALE_CTYPE
USE_LOCALE_NUMERIC
USE_LOCALE_TIME
USE_PERLIO
USE_PERL_ATOF
USE_REENTRANT_API
Locally applied patches:
DEBPKG:debian/cpan_definstalldirs - Provide a sensible INSTALLDIRS default for modules installed from CPAN.
DEBPKG:debian/db_file_ver - https://bugs.debian.org/340047 Remove overly restrictive DB_File version check.
DEBPKG:debian/doc_info - Replace generic man(1) instructions with Debian-specific information.
DEBPKG:debian/enc2xs_inc - https://bugs.debian.org/290336 Tweak enc2xs to follow symlinks and ignore missing @INC directories.
DEBPKG:debian/errno_ver - https://bugs.debian.org/343351 Remove Errno version check due to upgrade problems with long-running processes.
DEBPKG:debian/libperl_embed_doc - https://bugs.debian.org/186778 Note that libperl-dev package is required for embedded linking
DEBPKG:fixes/respect_umask - Respect umask during installation
DEBPKG:debian/writable_site_dirs - Set umask approproately for site install directories
DEBPKG:debian/extutils_set_libperl_path - EU:MM: set location of libperl.a under /usr/lib
DEBPKG:debian/no_packlist_perllocal - Don't install .packlist or perllocal.pod for perl or vendor
DEBPKG:debian/fakeroot - Postpone LD_LIBRARY_PATH evaluation to the binary targets.
DEBPKG:debian/instmodsh_doc - Debian policy doesn't install .packlist files for core or vendor.
DEBPKG:debian/ld_run_path - Remove standard libs from LD_RUN_PATH as per Debian policy.
DEBPKG:debian/libnet_config_path - Set location of libnet.cfg to /etc/perl/Net as /usr may not be writable.
DEBPKG:debian/mod_paths - Tweak @INC ordering for Debian
DEBPKG:debian/perlivp - https://bugs.debian.org/510895 Make perlivp skip include directories in /usr/local
DEBPKG:debian/deprecate-with-apt - https://bugs.debian.org/747628 Point users to Debian packages of deprecated core modules
DEBPKG:debian/squelch-locale-warnings - https://bugs.debian.org/508764 Squelch locale warnings in Debian package maintainer scripts
DEBPKG:debian/patchlevel - https://bugs.debian.org/567489 List packaged patches for 5.26.1-3 in patchlevel.h
DEBPKG:fixes/document_makemaker_ccflags - https://bugs.debian.org/628522 [rt.cpan.org #68613] Document that CCFLAGS should include $Config{ccflags}
DEBPKG:debian/find_html2text - https://bugs.debian.org/640479 Configure CPAN::Distribution with correct name of html2text
DEBPKG:debian/perl5db-x-terminal-emulator.patch - https://bugs.debian.org/668490 Invoke x-terminal-emulator rather than xterm in perl5db.pl
DEBPKG:debian/cpan-missing-site-dirs - https://bugs.debian.org/688842 Fix CPAN::FirstTime defaults with nonexisting site dirs if a parent is writable
DEBPKG:fixes/memoize_storable_nstore - [rt.cpan.org #77790] https://bugs.debian.org/587650 Memoize::Storable: respect 'nstore' option not respected
DEBPKG:debian/makemaker-pasthru - https://bugs.debian.org/758471 Pass LD settings through to subdirectories
DEBPKG:debian/makemaker-manext - https://bugs.debian.org/247370 Make EU::MakeMaker honour MANnEXT settings in generated manpage headers
DEBPKG:debian/kfreebsd-softupdates - https://bugs.debian.org/796798 Work around Debian Bug #796798
DEBPKG:fixes/autodie-scope - https://bugs.debian.org/798096 Fix a scoping issue with "no autodie" and the "system" sub
DEBPKG:fixes/memoize-pod - [rt.cpan.org #89441] Fix POD errors in Memoize
DEBPKG:debian/hurd-softupdates - https://bugs.debian.org/822735 Fix t/op/stat.t failures on hurd
DEBPKG:fixes/math_complex_doc_great_circle - https://bugs.debian.org/697567 [rt.cpan.org #114104] Math::Trig: clarify definition of great_circle_midpoint
DEBPKG:fixes/math_complex_doc_see_also - https://bugs.debian.org/697568 [rt.cpan.org #114105] Math::Trig: add missing SEE ALSO
DEBPKG:fixes/math_complex_doc_angle_units - https://bugs.debian.org/731505 [rt.cpan.org #114106] Math::Trig: document angle units
DEBPKG:fixes/cpan_web_link - https://bugs.debian.org/367291 CPAN: Add link to main CPAN web site
DEBPKG:fixes/time_piece_doc - https://bugs.debian.org/817925 Time::Piece: Improve documentation for add_months and add_years
DEBPKG:fixes/extutils_makemaker_reproducible - https://bugs.debian.org/835815 https://bugs.debian.org/834190 Make perllocal.pod files reproducible
DEBPKG:fixes/file_path_hurd_errno - File-Path: Fix test failure in Hurd due to hard-coded ENOENT
DEBPKG:debian/hppa_op_optimize_workaround - https://bugs.debian.org/838613 Temporarily lower the optimization of op.c on hppa due to gcc-6 problems
DEBPKG:debian/installman-utf8 - https://bugs.debian.org/840211 Generate man pages with UTF-8 characters
DEBPKG:fixes/file_path_chmod_race - https://bugs.debian.org/863870 [rt.cpan.org #121951] Prevent directory chmod race attack.
DEBPKG:fixes/extutils_file_path_compat - Correct the order of tests of chmod(). (#294)
DEBPKG:fixes/getopt-long-2 - [rt.cpan.org #120300] Withdraw part of commit 5d9947fb445327c7299d8beb009d609bc70066c0, which tries to implement more GNU getopt_long campatibility. GNU
DEBPKG:fixes/getopt-long-3 - provide a default value for optional arguments
DEBPKG:fixes/getopt-long-4 - https://bugs.debian.org/864544 [rt.cpan.org #122068] Fix issue #122068. DEBPKG:fixes/test-builder-reset - https://bugs.debian.org/865894 Reset inside subtest maintains parent
DEBPKG:debian/hppa_opmini_optimize_workaround - https://bugs.debian.org/869122 Lower the optimization level of opmini.c on hppa
DEBPKG:debian/sh4_op_optimize_workaround - https://bugs.debian.org/869373 Also lower the optimization level of op.c and opmini.c on sh4
DEBPKG:fixes/json-pp-example - [rt.cpan.org #92793] https://bugs.debian.org/871837 fix RT-92793: bug in SYNOPSIS
DEBPKG:debian/perldoc-pager - https://bugs.debian.org/870340 [rt.cpan.org #120229] Fix perldoc terminal escapes when sensible-pager is less
DEBPKG:debian/prune_libs - https://bugs.debian.org/128355 Prune the list of libraries wanted to what we actually need.
DEBPKG:debian/configure-regen - https://bugs.debian.org/762638 Regenerate Configure et al. after probe unit changes
DEBPKG:fixes/rename-filexp.U-phase1 - regen-configure: rename filexp.U to filexp_path.U, phase 1
DEBPKG:fixes/rename-filexp.U-phase2 - regen-configure: rename filexp.U to filexp_path.U, phase 2
DEBPKG:fixes/packaging_test_skips - Skip various tests if PERL_BUILD_PACKAGING is set
Built under linux
Compiled at Nov 28 2017 17:44:14
%ENV:
PERL5LIB="/home/richard/perl5/lib/perl5"
PERL_LOCAL_LIB_ROOT="/home/richard/perl5"
PERL_MB_OPT="--install_base "/home/richard/perl5""
PERL_MM_OPT="INSTALL_BASE=/home/richard/perl5"
@INC:
/home/richard/perl5/lib/perl5/x86_64-linux-gnu-thread-multi
/home/richard/perl5/lib/perl5
/etc/perl
/usr/local/lib/x86_64-linux-gnu/perl/5.26.1
/usr/local/share/perl/5.26.1
/usr/lib/x86_64-linux-gnu/perl5/5.26
/usr/share/perl5
/usr/lib/x86_64-linux-gnu/perl/5.26
/usr/share/perl/5.26
/home/richard/perl5/lib/perl5/5.26.0
/usr/local/lib/site_perl
/usr/lib/x86_64-linux-gnu/perl-base

Anonymous
Sat 16 Dec 2017 07:02:00 PM UTC, comment #1:

I cannot reproduce the error, so the error depends on your environment or distribution.

More information needed. Please follow https://www.gnu.org/software/parallel/man.html#REPORTING-BUGS

Ole Tange <tange>
Project AdministratorIn charge of this item.
Thu 30 Nov 2017 05:41:35 PM UTC, original submission:

Error is:

While deparsing /home/richard/bin/parallel near line 2991,
Can't locate object method "unctrl" via package "" (perhaps you forgot to load ""?) at /usr/share/perl/5.26/B/Deparse.pm line 5203.
CHECK failed--call queue aborted.

This error seems to effect 'sem' as well, but not parcat, sql, niceload.

Anonymous

 

(Note: upload size limit is set to 16384 kB, after insertion of the required escape characters.)

Attach File(s):
   
   
Comment:
   

Attached Files
file #42667:  parallel_deparse.out added by None (70KiB - application/octet-stream - executed command was 'perl -MO=Deparse /home/richard/bin/parallel'; GNU Parallel version is 20171122)

 

Depends on the following items: None found

Items that depend on this one: None found

 

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    Follow 3 latest changes.

    Date Changed By Updated Field Previous Value => Replaced By
    Sun 17 Dec 2017 07:35:05 PM UTCNoneAttached File-=>Added parallel_deparse.out, #42667
    Sat 16 Dec 2017 07:02:26 PM UTCtangeStatusNone=>Need Info
      Assigned toNone=>tange

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