bugGNU Octave - Bugs: bug #53570, Missing shared object version of...

 
 

bug #53570: Missing shared object version of Sundials on clang buildbots?

Submitter:  Rik <rik5>
Submitted:  Fri 06 Apr 2018 12:24:26 AM UTC
   
 
Category:  Configuration and Build System Severity:  3 - Normal
Priority:  5 - Normal Item Group:  Regression
Status:  Fixed Assigned to:  None
Originator Name:  Open/Closed:  * Closed
Release:  * dev Operating System:  * GNU/Linux
Fixed Release:  None Planned Release:  None
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Fri 06 Apr 2018 04:48:01 PM UTC, comment #2: 

OK, this problem seems to have been due to a botched installation of sundials.  I wiped out all of my sundials packages and then installed libsundials-dev and the buildbots seem happy again, at least for the compile step.  Closing report as fixed.

John W. Eaton <jwe>
Group administrator
Fri 06 Apr 2018 11:01:57 AM UTC, comment #1: 

This problem only seems to be affecting my two Clang builds.  The GCC builds on the same systems with the same set of libsundials packages appear to be building correctly.

John W. Eaton <jwe>
Group administrator
Fri 06 Apr 2018 12:24:26 AM UTC, original submission:  

The clang-4.0-debian and clang-5.0-debian buildbots are failing with this message:


/bin/bash ./libtool  --tag=CXX   --mode=link clang++-5.0 -std=gnu++11 -fPIC -pthread -fopenmp -Wall -W -Wshadow -Wold-style-cast -Wformat -Wpointer-arith -Wwrite-strings -Wcast-align -Wcast-qual  -g -O2 -avoid-version -module -no-undefined     -o libinterp/dldfcn/__voronoi__.la -rpath /usr/local/lib/octave/4.5.0+ libinterp/dldfcn/libinterp_dldfcn___voronoi___la-__voronoi__.lo libinterp/liboctinterp.la liboctave/liboctave.la -lqhull  -lutil -lm
/usr/bin/ld: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../libsundials_ida.a(ida.o): relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../libsundials_ida.a(ida_io.o): relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../libsundials_ida.a(ida_direct.o): relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../libsundials_ida.a(ida_dense.o): relocation R_X86_64_32S against symbol `idaDlsDenseDQJac' can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: /usr/bin/../lib/gcc/x86_64-linux-gnu/7.3.0/../../../libsundials_ida.a(sundials_direct.o): relocation R_X86_64_32 against `.rodata.str1.1' can not be used when making a shared object; recompile with -fPIC


Did the wrong Sundials library get installed?  A static version rather than a .so version?

Rik <rik5>
Group administrator

 

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    Date Changed by Updated Field Previous Value => Replaced by
    2018-04-06 jwe StatusConfirmed Fixed
        Open/ClosedOpen Closed

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